The detailed information of tRNA gene sequence


Sequence ID>WENV170718764
Genome IDLSQX01090088
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 8944
End posion on genome 9027
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagtttttag
tRNA gene sequence 
GCTGAGGTAGTCTAGCGGTAGGGCGCGGGCCTGGAAAGCCCGTGAGGCGAAAGTCTCTCG
GGAGTTCAAATCTCCCCCTCAGCGttc
Downstream region at tRNA end position 
ttgttttaga
Secondary structure (Cloverleaf model)
>WENV170718764	Ser	GGA
                   g      Gttc ttgttttaga
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     A
      C     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGAGGCGAAAGTCTCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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