The detailed information of tRNA gene sequence


Sequence ID>WENV170719035
Genome IDLSQX01100045
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2238
End posion on genome 2149
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccacaagac
tRNA gene sequence 
GGAGAGATGGCGGAGTGGTTGAACGCGCCGGTCTTGAAAACCGGATTCCGCGCAAGCGGA
ACGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tccccctcca
Secondary structure (Cloverleaf model)
>WENV170719035	Ser	TGA
                   c      GCCA tccccctcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C G       G G G G G     C
    G         | | |                 T T
    T       A C G C
      T G A        G     ATTCCGCGCAAGCGGAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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