The detailed information of tRNA gene sequence


Sequence ID>WENV170719085
Genome IDLSQX01102042
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2252
End posion on genome 2179
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
tcgatgcatg
tRNA gene sequence
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGGAGGTCTCGAGTTCGAA
TCTCGACGAGCCCAtta
Downstream region at tRNA end position
tccttctttt
Secondary structure (Cloverleaf model)
>WENV170719085	Val	CAC
                   g      Atta tccttctttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     A G C T C     A
      C G A        G      | | | | |     G
    T       T C T G       T C G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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