The detailed information of tRNA gene sequence


Sequence ID>WENV170719093
Genome IDLSQX01102121
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11283
End posion on genome 11207
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcataaaagg
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTCAGAGCTACCGGCTCATAACCGGTTGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
aaaaagcacc
Secondary structure (Cloverleaf model)
>WENV170719093	Met	CAT
                   g      ACCA aaaaagcacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A   A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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