The detailed information of tRNA gene sequence


Sequence ID>WENV170719121
Genome IDLSQX01103185
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6791
End posion on genome 6865
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcttatctgc
tRNA gene sequence 
CGGGGTGTAGCGCAGACGGCTAGCGCGCCGCGTTTGGGACGCGGAGGTCGGCGGTTCAAG
TCCGCCCACCCCGACtg
Downstream region at tRNA end position 
gttgaagagt
Secondary structure (Cloverleaf model)
>WENV170719121	Pro	TGG
                   c      ACtg gttgaagagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      A G A        A      | | | | |     A
    C       C G C G       G G C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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