The detailed information of tRNA gene sequence


Sequence ID>WENV170719153
Genome IDLSQX01103834
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 848
End posion on genome 923
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cataaggcat
tRNA gene sequence 
CGGGGTGTGGCTCAGGTGGTAGAGCGCTTGGTTCGGGACCAAGAGGCCGCAGGTTCAAGT
CCTGTCACTCCGACCA
Downstream region at tRNA end position 
gttgaagaca
Secondary structure (Cloverleaf model)
>WENV170719153	Pro	CGG
                   t      ACCA gttgaagaca
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      G G A        G      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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