The detailed information of tRNA gene sequence


Sequence ID>WENV170719247
Genome IDLSQX01107029
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 13335
End posion on genome 13250
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
agtcaaaatT
tRNA gene sequence 
GCGAGGGTTGCCAAGCCAGGTTAACGGCGCAGGGTTTAGGACCCTGTCTCTAGGAGTTCA
AGGGTTCGAATCCCTTCCCTCGCATtc
Downstream region at tRNA end position 
ctttttctaa
Secondary structure (Cloverleaf model)
>WENV170719247	Leu	TAG
                   T      ATtc ctttttctaa
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        T      | | | | |     G
  A         A C C G       A A G G G     C
  G           | | |                 T T
  G         C G G C
    T T A A        G     TCTCTAGGAGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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