The detailed information of tRNA gene sequence


Sequence ID>WENV170719304
Genome IDLSQX01109696
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12073
End posion on genome 12149
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaagtaatt
tRNA gene sequence 
GGCTCTTTAGCTCAGTCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCCCCGTTCGAA
TCGGGGAAGAGCCACCA
Downstream region at tRNA end position 
aagaattcgt
Secondary structure (Cloverleaf model)
>WENV170719304	Met	CAT
                   t      ACCA aagaattcgt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     G G G G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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