The detailed information of tRNA gene sequence


Sequence ID>WENV170719392
Genome IDLSQX01112792
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 182
End posion on genome 106
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaatctcaa
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGCTAGAGCATTCGGTTCATACCCGAAGTGTCACTGGTTCAAA
TCCAGTTGCCGCTACCA
Downstream region at tRNA end position 
gtatttaccg
Secondary structure (Cloverleaf model)
>WENV170719392	Met	CAT
                   a      ACCA gtatttaccg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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