The detailed information of tRNA gene sequence


Sequence ID>WENV170719454
Genome IDLSQX01115316
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 891
End posion on genome 816
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaaattgct
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGCGGTTCGATC
CCGCATGGCTCCACCA
Downstream region at tRNA end position 
cttaccgcgc
Secondary structure (Cloverleaf model)
>WENV170719454	Ala	TGC
                   t      ACCA cttaccgcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     A C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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