The detailed information of tRNA gene sequence


Sequence ID>WENV170719612
Genome IDLSQX01120356
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5117
End posion on genome 5192
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attttattat
tRNA gene sequence 
GGGCGGATAGCTCAGTCGGCAGAGCACCTGCTTCACATGTAGGGGGTCACAGGTTCAAGT
CCTGTTCCGCCTACCA
Downstream region at tRNA end position 
ttttttnnnn
Secondary structure (Cloverleaf model)
>WENV170719612	Val	CAC
                   t      ACCA ttttttnnnn
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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