The detailed information of tRNA gene sequence


Sequence ID>WENV170719715
Genome IDLSQX01124109
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1598
End posion on genome 1523
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaggtacat
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGGAGAGCGCCTGCTTTGCACGCAGGAGGCCGTCGGTTCGATT
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
gtttcaggat
Secondary structure (Cloverleaf model)
>WENV170719715	Ala	TGC
                   t      ACCA gtttcaggat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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