The detailed information of tRNA gene sequence


Sequence ID>WENV170719858
Genome IDLSQX01131321
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1552
End posion on genome 1628
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnaaatgg
tRNA gene sequence 
CTGGGTGTGGCGCAGTTTGGTAGCGTGCTTGAATGGGGTTCAAGAGGTCGCAGGTTCAAT
TCCTGTCACCCAGACCA
Downstream region at tRNA end position 
aagaaaaccg
Secondary structure (Cloverleaf model)
>WENV170719858	Pro	GGG
                   g      ACCA aagaaaaccg
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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