The detailed information of tRNA gene sequence


Sequence ID>WENV170719913
Genome IDLSQX01133528
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 13234
End posion on genome 13320
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaggtccgga
tRNA gene sequence 
GCCGAGATAGTCTAGTCCGGAAAGGCGGTGGCCTTGAAAGCCTCTGGTAGTAATACCTCG
GGAGTTCAAATCTCCCTCTCGGCGCCA
Downstream region at tRNA end position 
ttttgaaccg
Secondary structure (Cloverleaf model)
>WENV170719913	Ser	TGA
                   a      GCCA ttttgaaccg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGTAGTAATACCTC
                    G - C
                    T   T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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