The detailed information of tRNA gene sequence


Sequence ID>WENV170719941
Genome IDLSQX01134426
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1273
End posion on genome 1346
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggttcttat
tRNA gene sequence 
ACGGGTCTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCGATCCGTGCat
Downstream region at tRNA end position 
aattatctaa
Secondary structure (Cloverleaf model)
>WENV170719941	Trp	CCA
                   t      GCat aattatctaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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