The detailed information of tRNA gene sequence


Sequence ID>WENV170720126
Genome IDLSQX01142050
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 27965
End posion on genome 27890
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tttatttttt
tRNA gene sequence 
GGCCAGGTAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGGAGTTCGATT
CTCCCCCAGGCCACCA
Downstream region at tRNA end position 
gatataaaaa
Secondary structure (Cloverleaf model)
>WENV170720126	Phe	GAA
                   t      ACCA gatataaaaa
                     G - C
                     G - C
                     C - G
                     C - G
                     A   A
                     G - C
                     G - C          T T
                    T     C C C T C     A
      T G A        A      | | | | |     G
    C       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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