The detailed information of tRNA gene sequence


Sequence ID>WENV170720222
Genome IDLSQX01145255
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11771
End posion on genome 11843
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
tcagaatagt
tRNA gene sequence
GCCCGAGTAGCGCAATGGTAGCGCAACCGACTTGTAATCGGTAGGTTAGTGGGTTCGAGT
CCCCTCTCGGGCTgtt
Downstream region at tRNA end position
cctgctattt
Secondary structure (Cloverleaf model)
>WENV170720222	Thr	TGT
                   t      Tgtt cctgctattt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T C C C C     A
        A A        A      +   | | |     G
      T     C G C G       G T G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     AGGTTA
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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