The detailed information of tRNA gene sequence


Sequence ID>WENV170720224
Genome IDLSQX01145255
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12057
End posion on genome 12129
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gaaaggagat
tRNA gene sequence 
GCCCACATAGCTCAGTTGGTAGAGCACGTTCTTGGTAAGAACGGGGTCATCAGTTCGAAT
CTGATTGTGGGCTtaa
Downstream region at tRNA end position 
atcaaagggg
Secondary structure (Cloverleaf model)
>WENV170720224	Thr	GGT
                   t      Ttaa atcaaagggg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     A - T          T A
                    T     T A G T C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    T - A
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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