The detailed information of tRNA gene sequence


Sequence ID>WENV170720301
Genome IDLSQX01148238
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2264
End posion on genome 2193
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position
agatatttcc
tRNA gene sequence
GGGCTCGTATATCAGGGGTAGATAGCTACGTTCGCAACGTAGATGCCGCGGGTTCAAATC
CCGCCGGGTCCAttc
Downstream region at tRNA end position
ggtttttacc
Secondary structure (Cloverleaf model)
>WENV170720301	Ala	CGC
                   c      Attc ggtttttacc
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A T       G C G G G     C
      G     | | | |                 T T
      G     G A T A
        T A        G     ATGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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