The detailed information of tRNA gene sequence


Sequence ID>WENV170720314
Genome IDLSQX01148635
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 312
End posion on genome 236
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgctccattt
tRNA gene sequence 
GCGCCTGTAGCTCAGCAGGATAGAGCAACGGACTTCTAATCCGTAGGCCAGAGGTTCGAA
TCCTCTCAGGCGCGCCA
Downstream region at tRNA end position 
tttgttttgt
Secondary structure (Cloverleaf model)
>WENV170720314	Arg	TCT
                   t      GCCA tttgttttgt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      | | | | |     G
    A       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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