The detailed information of tRNA gene sequence


Sequence ID>WENV170720453
Genome IDLSQX01153574
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 819
End posion on genome 894
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcaacgttct
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttttctcaa
Secondary structure (Cloverleaf model)
>WENV170720453	Trp	CCA
                   t      GCCA cttttctcaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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