The detailed information of tRNA gene sequence


Sequence ID>WENV170720454
Genome IDLSQX01153586
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7358
End posion on genome 7433
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttcattctta
tRNA gene sequence 
GCCGGCTTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGAAGGTCACGAGTTCGACT
CTTGTAGCCGGCACCA
Downstream region at tRNA end position 
aattctcttt
Secondary structure (Cloverleaf model)
>WENV170720454	Thr	TGT
                   a      ACCA aattctcttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T C
                    T     T G T T C     A
      T G A        A      | | + | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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