The detailed information of tRNA gene sequence


Sequence ID>WENV170720499
Genome IDLSQX01155556
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 171
End posion on genome 243
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
taggtacact
tRNA gene sequence 
GCCAGGGTGGGGTAGACGGTTATCCTAAGGGACTGTGGATCCCTCGACCCGGGTTCGAAT
CTCGGCCCTGGCCttc
Downstream region at tRNA end position 
ctatttcact
Secondary structure (Cloverleaf model)
>WENV170720499	His	GTG
                   t      Cttc ctatttcact
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
      A G A        G      | | | + |     G
    C       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      T T A        A     CGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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