The detailed information of tRNA gene sequence


Sequence ID>WENV170720510
Genome IDLSQX01156003
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 290
End posion on genome 366
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cgttttttaa
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAG
CCCCGTTTCCCGCTCCA
Downstream region at tRNA end position 
tttcaacgcg
Secondary structure (Cloverleaf model)
>WENV170720510	Gly	TCC
                   a      TCCA tttcaacgcg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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