The detailed information of tRNA gene sequence


Sequence ID>WENV170720524
Genome IDLSQX01156421
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 424
End posion on genome 496
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaaatacagt
tRNA gene sequence 
GCCTTAGTGGCTCAGGTGGTAGAGCGATGCCTTGGTAAGGCATAGGTCGCGGGTTCGAAT
CCCGCCTAAGGCTttt
Downstream region at tRNA end position 
cattgatttt
Secondary structure (Cloverleaf model)
>WENV170720524	Thr	GGT
                   t      Tttt cattgatttt
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T
                     G - C          T A
                    T     C G C C C     A
      G G A        G      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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