The detailed information of tRNA gene sequence


Sequence ID>WENV170720528
Genome IDLSQX01156478
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2589
End posion on genome 2514
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttatttttcc
tRNA gene sequence 
GGGGATGTAGCTCAACTGGGAGAGCGCGGCGTTCGCAATGCCGAGGTCAGGGGTTCGAGC
CCCCTCATCTCCACCA
Downstream region at tRNA end position 
gaacataatc
Secondary structure (Cloverleaf model)
>WENV170720528	Ala	CGC
                   c      ACCA gaacataatc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C G
                    T     T C C C C     A
      C A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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