The detailed information of tRNA gene sequence


Sequence ID>WENV170720572
Genome IDLSQX01157830
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 61257
End posion on genome 61333
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccaaaat
tRNA gene sequence 
GGCCTGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
CCCCTTCCAGGTCGCCA
Downstream region at tRNA end position 
tttgacgttt
Secondary structure (Cloverleaf model)
>WENV170720572	Asp	GTC
                   t      GCCA tttgacgttt
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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