The detailed information of tRNA gene sequence


Sequence ID>WENV170720705
Genome IDLSQX01162923
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9735
End posion on genome 9657
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aggtaccctT
tRNA gene sequence 
GGGATAGTAGGGTAGCTTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACCGCGGTTCAA
ATCCGCGCTATCCCATCA
Downstream region at tRNA end position 
ttttttatct
Secondary structure (Cloverleaf model)
>WENV170720705	Pro	TGG
                   T      ATCA ttttttatct
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T A
                    T     G C G C C     A
    T C G A        A      | | | | |     A
  T         T G G G       C G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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