The detailed information of tRNA gene sequence


Sequence ID>PHG0100201
Genome IDAY078382
Search identical group
Phylum/ClassPodoviridae
SpeciesPseudomonas virus PaP3 (AY078382)
Start position on genome 1880
End posion on genome 1955
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccaccattaa
tRNA gene sequence 
CTCCTCGTAGCTCAGTCTGGTTAGAGTGCCTGCCTTGGAAGCAGGAGGTCGTAGGTTCGA
ATCCTACCGGGGTGACat
Downstream region at tRNA end position 
tagagagata
Secondary structure (Cloverleaf model)
>PHG0100201	Pro	TGG
                   a      ACat tagagagata
                     C - G
                     T   T
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C A T C C     A
    C T G A        A      | | | | |     G
  T         C T C G       G T A G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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