The detailed information of tRNA gene sequence


Sequence ID>WENV170720790
Genome IDLSQX01166481
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4393
End posion on genome 4320
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
taactagcat
tRNA gene sequence 
GCCCTCGTAGCTCAGTGGATAGAGCACGGCTCTCCTAAAGCCGGTGTCGTAGGTTCGATT
CCTATCGAGGGCGCtt
Downstream region at tRNA end position 
tgtgttctag
Secondary structure (Cloverleaf model)
>WENV170720790	Arg	CCT
                   t      GCtt tgtgttctag
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     T A T C C     A
      T G A        A      + | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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