The detailed information of tRNA gene sequence


Sequence ID>WENV170720878
Genome IDLSQX01170115
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 320
End posion on genome 245
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcattcttta
tRNA gene sequence 
GCCGGCTTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGAAGGTCACGAGTTCGACT
CTTGTAGCCGGCACCA
Downstream region at tRNA end position 
tctttcttct
Secondary structure (Cloverleaf model)
>WENV170720878	Thr	TGT
                   a      ACCA tctttcttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T C
                    T     T G T T C     A
      T G A        A      | | + | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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