The detailed information of tRNA gene sequence


Sequence ID>WENV170720888
Genome IDLSQX01170376
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 22267
End posion on genome 22343
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cacaatgtgt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGTATCTGAATGGGGTTCAGAGGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttccaattt
Secondary structure (Cloverleaf model)
>WENV170720888	Pro	GGG
                   t      ACCA tttccaattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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