The detailed information of tRNA gene sequence


Sequence ID>WENV170721010
Genome IDLSQX01175751
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2760
End posion on genome 2684
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acttttaaat
tRNA gene sequence 
CGCGGAATAGAGCAGCTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACAGGTTCAAA
TCCTGTTTCCGCAACCA
Downstream region at tRNA end position 
acaagcttaa
Secondary structure (Cloverleaf model)
>WENV170721010	Met	CAT
                   t      ACCA acaagcttaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G T C C     A
      C G A        A      | | | | |     A
    T       C G A G       A C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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