The detailed information of tRNA gene sequence


Sequence ID>WENV170721020
Genome IDLSQX01176001
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1119
End posion on genome 1045
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaagtaaga
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAAATCCCGGCGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCCCTCGCTAtgt
Downstream region at tRNA end position 
ccggttcttc
Secondary structure (Cloverleaf model)
>WENV170721020	Met	CAT
                   a      Atgt ccggttcttc
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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