The detailed information of tRNA gene sequence


Sequence ID>WENV170721046
Genome IDLSQX01177266
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 55184
End posion on genome 55109
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgcaccttgt
tRNA gene sequence 
GGGAGTATAGCTCAGCTGGGAGAGCACTTGCCTTACAAGCAAGGGGTCACAGGTTCGAGC
CCTGTTGTTCCCACCA
Downstream region at tRNA end position 
catggcccgg
Secondary structure (Cloverleaf model)
>WENV170721046	Val	TAC
                   t      ACCA catggcccgg
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T + G
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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