The detailed information of tRNA gene sequence


Sequence ID>PHG0100204
Genome IDAY129332
Search identical group
Phylum/ClassSiphoviridae
SpeciesMycobacterium virus Bxz2 PaP3 (AY129332)
Start position on genome 4048
End posion on genome 4122
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctcgcacat
tRNA gene sequence 
AGGCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTCGAG
TCCTGCCGTGTCTGCaa
Downstream region at tRNA end position 
ccacccagtt
Secondary structure (Cloverleaf model)
>PHG0100204	Trp	CCA
                   t      GCaa ccacccagtt
                     A - T
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGCT
                    G - C
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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