The detailed information of tRNA gene sequence


Sequence ID>WENV170721075
Genome IDLSQX01178568
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4142
End posion on genome 4217
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tagaaaccat
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCATGGTTCGCAATCATGAGGCCAGGGGTTCGATC
CCCCTATTCTCCACCA
Downstream region at tRNA end position 
accaccgaat
Secondary structure (Cloverleaf model)
>WENV170721075	Ala	CGC
                   t      ACCA accaccgaat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    A - T
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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