The detailed information of tRNA gene sequence


Sequence ID>WENV170721080
Genome IDLSQX01178760
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 71
End posion on genome 147
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccatttagtt
tRNA gene sequence 
CGGGAAGTAGCTTAGCTTGGTAGAGCGCCTGGTTTGGGACCAGGAGGTCGCAGGTTCAAA
TCCTGTTTTCCCGACCA
Downstream region at tRNA end position 
tctgcgggtg
Secondary structure (Cloverleaf model)
>WENV170721080	Pro	TGG
                   t      ACCA tctgcgggtg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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