The detailed information of tRNA gene sequence


Sequence ID>WENV170721167
Genome IDLSQX01181815
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6364
End posion on genome 6289
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cttaacatcg
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGGAGAGCGTACGGTTCGCATCCGTAAGGTCGAGAGTTCGATC
CTCTTCGTCTCCACCA
Downstream region at tRNA end position 
agttcaggaa
Secondary structure (Cloverleaf model)
>WENV170721167	Ala	CGC
                   g      ACCA agttcaggaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T T C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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