The detailed information of tRNA gene sequence


Sequence ID>WENV170721317
Genome IDLSQX01185594
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 235
End posion on genome 310
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acattaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAAT
CCTTCCTCCGCAACCA
Downstream region at tRNA end position 
aatcaagtgg
Secondary structure (Cloverleaf model)
>WENV170721317	Met	CAT
                   t      ACCA aatcaagtgg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      C G A        G      |   | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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