The detailed information of tRNA gene sequence


Sequence ID>WENV170721383
Genome IDLSQX01188196
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7585
End posion on genome 7511
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agatctgcct
tRNA gene sequence 
GCCCAGGTAGCTCAGTGGGAGAGCGCTGCCCTGAAGAGGCAGTTGTCCCCGGTTCGAATC
CGGGTCTGGGCACCA
Downstream region at tRNA end position 
aaaaacaggg
Secondary structure (Cloverleaf model)
>WENV170721383	Phe	GAA
                   t      ACCA aaaaacaggg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     C T C G       C C C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     TTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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