The detailed information of tRNA gene sequence


Sequence ID>WENV170721509
Genome IDLSQX01193538
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1139
End posion on genome 1226
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtagaagcga
tRNA gene sequence 
GCCGGGATAGTCTAGTCCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCTGGCACCTC
GGGAGTTCAAATCTCCCTCCCGGCGCTA
Downstream region at tRNA end position 
catcttctgt
Secondary structure (Cloverleaf model)
>WENV170721509	Ser	TGA
                   a      GCTA catcttctgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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