The detailed information of tRNA gene sequence


Sequence ID>WENV170721960
Genome IDLSQX01210885
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 97923
End posion on genome 97999
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccatacatgc
tRNA gene sequence 
GGCCTGGTAGTTCAGATGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGAGTTCGAG
TCTCTTCCAGGTCGCCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170721960	Asp	GTC
                   c      GCCA tnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C T C     A
      A G A        A      + | | | |     G
    T       C T T G       G A G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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