The detailed information of tRNA gene sequence


Sequence ID>WENV170722067
Genome IDLSQX01215139
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3221
End posion on genome 3297
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttatataaaa
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCACCTGCCTTACAAGCAGGGGGTCATAGGTTCGAG
TCCTATATCGCCCACCA
Downstream region at tRNA end position 
tttatttgcc
Secondary structure (Cloverleaf model)
>WENV170722067	Val	TAC
                   a      ACCA tttatttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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