The detailed information of tRNA gene sequence


Sequence ID>WENV170722153
Genome IDLSQX01218129
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1527
End posion on genome 1600
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaatgaatac
tRNA gene sequence 
GGGGCTATGGCGCAGCTGGTAGCGCACCACACTGGCAGTGTGGGGGTCAGGGGTTCGAGT
CCCCTTAGCTCCACtg
Downstream region at tRNA end position 
aacgggcaac
Secondary structure (Cloverleaf model)
>WENV170722153	Ala	GGC
                   c      ACtg aacgggcaac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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