The detailed information of tRNA gene sequence


Sequence ID>WENV170722179
Genome IDLSQX01219880
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 13409
End posion on genome 13485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgattaaga
tRNA gene sequence 
GGCTCTTTAGCTCAGTCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCCCCGTTCGAG
TCGGGGAAGAGCCACCA
Downstream region at tRNA end position 
aatcacttaa
Secondary structure (Cloverleaf model)
>WENV170722179	Met	CAT
                   a      ACCA aatcacttaa
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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