The detailed information of tRNA gene sequence


Sequence ID>WENV170722285
Genome IDLSQX01224050
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 20843
End posion on genome 20767
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgttaccaat
tRNA gene sequence 
CGGGGTATAGCGCAGCCTGGTAGCGCACTTGTCTGGGGGACAAGTGGTCGTCGGTTCGAA
TCCGGCTACCCCGACCA
Downstream region at tRNA end position 
aatttgcgag
Secondary structure (Cloverleaf model)
>WENV170722285	Pro	GGG
                   t      ACCA aatttgcgag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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