The detailed information of tRNA gene sequence


Sequence ID>WENV170722410
Genome IDLSQX01228678
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 31713
End posion on genome 31639
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaaattttct
tRNA gene sequence 
GGGGACGTAGCTCAGGGGGAGAGCGCTTGACTCACATTCAAGAGGTCGGAGGTTCAAATC
CTCTCGTCCCCACCA
Downstream region at tRNA end position 
gtaaagtgaa
Secondary structure (Cloverleaf model)
>WENV170722410	Val	CAC
                   t      ACCA gtaaagtgaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
        G A        A      + | | | |     A
      G     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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