The detailed information of tRNA gene sequence


Sequence ID>WENV170722516
Genome IDLSQX01232629
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2174
End posion on genome 2245
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttcaaaaat
tRNA gene sequence 
GCCAAGATGGCGGAGCGGCTACGCAATCGCCTGCAGAGCGATACCATTCCGGTTCGAATC
CGGATCTTGGCTttt
Downstream region at tRNA end position 
ctcttctaat
Secondary structure (Cloverleaf model)
>WENV170722516	Cys	GCA
                   t      Tttt ctcttctaat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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