The detailed information of tRNA gene sequence


Sequence ID>WENV170722589
Genome IDLSQX01234693
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2997
End posion on genome 3070
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agaccgaagt
tRNA gene sequence 
GTCCGGATAGTGTAGAGGCCTATCATGGAGCCCTGTCGAGGCTCCGACCCGGGTTCGAAT
CCCGGTCCGGGCGCtt
Downstream region at tRNA end position 
cttttttttc
Secondary structure (Cloverleaf model)
>WENV170722589	Asp	GTC
                   t      GCtt cttttttttc
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      A G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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